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Publications

1. S. Erramilli and M. K. Hong (2001) “Proposed Raman Microscope using Quantum Entangled Photons” (to appear).

2. M. K. Hong and S. Erramilli (2001) “Near-field Infrared Microscopy under water using a Quantum Cascade Laser” (submitted).

3. N. Dokholyan, S. Bulderyev, H. E. Stanley, J. Y. Kim, M. K. Hong and S. Erramilli (2001) “Geometry effects in colony growth models” (in preparation).

4. S. Erramilli, M. K. Hong and P. Huie (2000) "Breaking the Femtogram barrier in near-field infrared microsopy," Proc. SPIE 3918, 197-201.

5. M. K. Hong, N. Dokholyan, A. Jeung, T. I. Smith, H. A. Schwettman, P. Huie, Shyamsunder Erramilli (1998) "Infrared Images in liquid water obtained using a Scanning Near Field Infrared Microscope based on a Free Electron Laser," Nucl. Inst. Methods. Phys. Res. Sect. B 144, 246-255.

6. A. G. Jeung, P. Huie, S. Erramilli, M. K. Hong and T. I. Smith (1997) "Application of Scanning Near Field Infrared Spectroscopy to Biomedical studies," Proc. SPIE 3153, 115-122.

7. M. K. Hong, A. Jeung, P. Huie and Shyamsunder Erramilli (1996) "Development of a Scanning Near Field Infrared Microscope based on a Free Electron Laser," Proc. SPIE 2863, 54-63

8. M. D. Rintoul, S. Torquato, I. A. Aksay, S. Erramilli “ Structure and transport properties of a porous magnetic gel via x-ray microtomography”, Phys. Rev. E 54: 2663 (1996).

9. D. Hajduk, R. Register, L. Fetters, S. M. Gruner, K. Brister, L. J. Fetters Shyamsunder Erramilli ``High-Pressure Effects on the Disordered Phase of Block Copolymer Melts'' Macromolecules 28:, 7148-7156 (1995).

10. S. Erramilli, F. Osterberg, S. M. Gruner, M. W. Tate and M. Kriechbaum ``Time-Resolved X-ray diffraction studies of Pressure-jump induced topological transitions in biological membranes'' Proc. SPIE 2521: 188-196 (1995).

11. Shyamsunder Erramilli, F. Osterberg and B. Vogelaar "Undergraduate laboratory: Principles of Gel Electrophoresis'' American Journal of Physics 63:, 639-643 (1995).

12. Osterberg, M. Kriechbaum, M. W. Tate, A. Polcyn, V. Skita, P. T. C. So, S. M. Gruner and Shyamsunder Erramilli "Time-Resolved X-ray diffraction studies of Pressure induced structural dynamics in membranes'' Physical Review Letters 72:, 2967-2970 (1994).

13. Yong-Nam Jun, Daniel Dabbs, Ilhan A. Aksay and Shyamsunder Erramilli "Processing of monolithic magnetic gels for magnetophoresis'' Langmuir 10:, 3377-3379 (1994).

14. R. H. Austin and Shyamsunder Erramilli. ``Low temperature spectroscopy'' Methods in Enzymology 246:, 131-168 (1994).

15. J. T. Gleeson, S. M. Gruner and Shyamsunder Erramilli ``Freezing and melting of water in membranes'', Biophysical Journal 67: 706-712 (1994).

16. M.K.Hong, A. G.Jeung and S. Erramilli, “Development of a Scanning Near Field Infrared Microscope based on a Free Electron Laser” First Free Electron Laser Users’ Workshop, Stanford CA (1994).

17. M. K. Hong, R. H. Austin, J. Plombon and R. Callender (1993) Collective Mode Lifetimes and Effects in Bacteriorhodopsin, in “Princeton Lectures in Biophysics” W. Bialek, ed., World Scientific, New Jersey.

18. A. Dickstein, S. Erramilli, R. E. Goldstein, D. Jackson and S. Langer “Labyrinthine Pattern Formation of Magnetic Fluids”, Science 261, 1021-1015 (1993).

19. P. T. C. So, S. M. Gruner and Shyamsunder Erramilli “Pressure Induced Topological Transitions in Membran.” Phys. Rev. Lett 72 3455-3458 (1993).

20. P. T. C. So, S. M. Gruner and E. Shyamsunder. ``Automated Pressure and Temperature Control System for x-ray diffraction studies'' (1992). Rev. Sci. Instr. 63: 1763-1770.

21. P. T. C. So, S. M. Gruner and E. Shyamsunder. ``High-Pressure Dilatometer'' (1992). Rev. Sci. Instr. 63: 5426-5431.

22. J. A. Barry, H. Lamparski, Erramilli Shyamsunder, F. Osterberrg, J. Cerne, M. F. Brown and D. F. O'Brien (1992) ``31P NMR and X-ray diffraction study of the effect of Photopolymerization on Lipid Polymoprhism'' Biochemistry 31: 10114-10120.

23. M. W. Tate, Erramilli Shyamsunder, Sol M. Gruner and K. L. D'Amico (1992). ``Kinetics of the Lamellar-Inverse Hexagonal Phase Transition Determined by Time-Resolved X-ray Diffraction'' Biochemistry 31: 1081-1092.

24. M. K. Hong, O. Narayan, E. Shyamsunder, R. E. Goldstein, D. S. Fisher, M. Hogan and R. H. Austin (1992) "Internal Dynamics of DNA Probed by Transient Electric Birefringence" Phys. Rev. Lett. 68, 1430-1433.

25. M. K. Hong, E. Shyamsunder, R. H. Austin, B. S. Gerstman and S. S. Chan (1991) "Time-resolved Infrared Studies of Molecular Diffusion in Myoglobin" Phys. Rev. Lett. 66, 2673-2676.

26. R. H. Austin, M. K. Hong, C. Moser and J. Plombaum (1991) "Far-Infrared Perturbation of Electron Tunneling in Photosynthetic Reaction" Center Chemical Physics 158 473-486.

27. M.W. Tate, E.F. Eikenberry, D.C. Turner, E. Shyamsunder and S.M. Gruner (1991). ``Nonbilayer phases of membrane lipids'' Chem.Phys. Lipids 57: 147-164.

28. S.M. Gruner and E. Shyamsunder (1991). ``Is the mechanism of general anesthesia related to lipid membrane spontaneous curvature?'' Annals N.Y. Acad. Sci. 625: 685-697.

29. H. Frauenfelder, N. A. Alberding, A. Ansari, D. Braunstein, B. R. Cowen, M. K. Hong, I. E. T. Iben, J. B. Johnson, S. Luck, M. C. Marden, J. R. Mourant, P. Ormos, L. Reinisch, R. Scholl, A. Schulte, E. Shyamsunder, L. B. Sorensen, P. J. Steinbach, A. Xie, R. D. Young and K. T. Yue (1990) "Proteins and Pressure" J. Phys. Chem. 94, 1024-1038.

30. M. K. Hong, D. Braunstein, B. R. Cowen, H. Frauenfelder, I. E. T. Iben, J. R. Mourant, P. Ormos, R. Scholl, A. Schulte, P. J. Steinbach, A. Xie and R. D. Young (1990) "Conformational Substates and Motions in Myoglobin: External Influences on Structure and Dynamics" Biophys. J. 58, 429-436.

31. P. Ormos, A. Ansari, D. Braunstein, B. R. Cowen, H. Frauenfelder, M. K. Hong, I. E. T. Iben, T. B. Sauke, P. J. Steinbach and R. D. Young (1990) "Inhomogeneous Broadening in Spectral Bands of Carbonmonoxymyoglobin" Biophys. J. 57, 191-199.

32. O. Narayan, P.T.C. So, D.C. Turner, S.M. Gruner, M.W. Tate and E. Shyamsunder (1990). ``Volume constriction in a lipid-water liquid crystal using high-pressure x-ray diffraction'' Phys. Rev. A 42: 7479-7482.

33. I. E. T. Iben, D. Braunstein, H. Frauenfelder, M. K. Hong, J. B. Johnson, S. Luck, P. Ormos, A. Schulte, P. J. Steinbach, J. Vittitow, A. Xie, R. D. Young (1989) "Glassy Behavior of a Protein" Phys. Rev. Lett. 62 , 1916-1919.

34. D. Braunstein, J. Berendzen, B. R. Cowen, K. Engeberg, H. Frauenfelder, M. K. Hong, P. Ormos, T. B. Sauke, R. Scholl, A. Schulte, S. G. Sligar, B. A. Springer, P. J. Steinbach and R. D. Young (1988) "Ligand Binding to Synthetic Mutant Myoglobin (His E7 --> Gly): Role of the Distal Histidine in CO Binding" Proc. Natl. Acad. Sci. USA 85, 8497-8501.

35. P. Ormos, D. Braunstein, H. Frauenfelder, M. K. Hong, S.L. Lin, T. B. Sauke and R. D. Young (1988) "Orientation of CO in Carbonmonoxymyoglbin" Proc. Natl. Acad. Sci. USA 85, 8492-8496.

36. A.J. Janoff, L.T. Boni, M.C. Popescu, S.R. Minchey, P.R. Cullis, T.D. Madden, T. Taraschi, S.M. Gruner, E. Shyamsunder, M.W. Tate, R. Mendelsohn and D. Bonner (1988). ``Unusual lipid structures selectively reduce the toxicity of amphotericin B''. Proc. Nat. Acad. Sci. USA 85 L 6122-6126.

37. E. Shyamsunder, P. Botos and S.M. Gruner (1988). ``X-ray diffraction study of the effects of pressure on bilayer to non-bilayer lipid membrane phase transitions.'' J. Chem. Phys. 90: 1293-1295.

38. G. Careri, E. Gratton and E. Shyamsunder (1988). ``Fine structure of the amide 1 band in acetanilide.'' Phys. Rev. A 37: 4048.

39. E. Shyamsunder, S.M. Gruner, M.W. Tate, D.C. Turner, P.T.C. So and C.P.S. Tilcock (1988). ``Observation of inverted cubic phase in hydrated dioleoylphosphatidylethanolamine membranes.'' Biochem. 27: 2332.

40. W. Doster, S.F. Bowne, H. Frauenfelder, L. Reinisch and E. Shyamsunder (1987). ``Recombination of carbon-monoxide to ferrous horse-radish peroxidase types A and C.'' {\it J. Mol. Biol. 194: 299-312.

41. A. Ansari, J. Berendzen, D. Braunstein, B. R. Cowen, H. Frauenfelder, M. K. Hong, I. E. T. Iben, J. B. Johnson, P. Ormos, T. B. Sauke, R. Scholl, A. Schulte, P. J. Steinbach, J. Vittitow and R. D. Young (1987) "Rebinding and Relaxation in the Myoglobin Pocket" Biophysical Chemistry 26, 337-355.

42. P. Ormos, D. Braunstein, M. K. Hong, S-L. Lin, J. Vittitow (1987) "Hole Burning in Bacteriorhodopsin in Biophysical Studies of Retinal Protein” 238-246.

43. C-H. Chang, R. Jonas. T. G. Ebrey, M. K. Hong and L. Eisenstein (1987) Protonation Change in the Interconversion of the Pink Membrane, Blue membrane in “Biophysical Studies of Retinal Proteins: Proceedings of a Conference in Memory of Laura Eisenstein” T. G. Ebrey, H. Frauenfelder, B. Honig and K. Nakanishi, Eds., Univ. of Illinois Press, Urbana-Champaign 156-166.

44. A. Ansari, E.E. Di Iorio, D.D. Diott, H. Frauenfelder, I.E.T. Iben, P. Langer, H. Roder, T. Sauke and E. Shyamsunder (1986). ``Ligand binding to heme proteins: the relevance of low-temperature data.'' Biochem. 25: 3139.

45. A.C. Scott, G. Careri, E. Gratton and E. Shyamsunder (1985). ``IR overtone spectrum of the vibrational soliton in crystalline acetanilide.'' Phys. Rev. B 32: 5551.

46. A. Ansari, J. Berendzen, S.F. Bowne, H. Frauenfelder, I.E.T. Iben, T.B. Sauke, E. Shyamsunder and R.D. Young (1985). ``Protein states and proteinquakes.'' Proc. Nat. Acad. Sci. USA 82: 5000.

47. F. Stetzkowski, R. Banerjee, M.C. Marden, D.K. Beece, S.F. Bowne, W. Doster, L. Eisenstein, H. Frauenfelder, C. Jung, L. Reinisch and E. Shyamsunder (1985). ``Dynamics of dioxygen and carbon monoxide binding to
soybean leghemoglobin.'' J. Biol. Chem. 260: 8803.

48. K. Bagley, V. Balogh-Nair, A. Crouteau, G. Dollinger, T. G. Ebrey, L. Eisenstein, M. K. Hong, K. Nakanishi and J. Vittitow (1985) “Fourier-Transform Infrared Difference Spectroscopy of Rhodopsin and its Photoproduct at Low Temperature” Biochemistry 24, 6066-6071.

49. K. Bagley, G. Dollinger, L. Eisenstein, M. K. Hong, J. Vittitow and L. Zimany (1984) “Infrared Studies in the Photocycle of Bacteriorhodopsin” in “Information and Energy Transduction in Biological Membrane” E. Helmreid, ed., New York, 27-37.

50. G. Careri, U. Vuonotempo, F. Galuzzi, A. C. Scott, E. Gratton and E. Shyamsunder “Spectroscopic for a Davydov-like soliton in acetanilide” Phys. Rev. B 30: 4689 (1984).

51. H. Roder, J. Berendzen, S.F. Bowne, H. Frauenfelder, T.B. Sauke, E. Shyamsunder and M.B. Weissman (1984). ``Comparison of the magnetic properties of deoxy and photodissociated myoglobin.'' Proc. Natl. Acad. Sci. USA 81: 235.

52. W. R. Perkins, R. B. Dause, T. S. Davis, P. L. Ahl, S. R. Minchey, T. F. Taraschi, Shyamsunder Erramilli, S. M. Gruner and A. S. Janoff ``Pressure Induced Fusion (PIF) Liposomes: A Solventless Sterlizing Method for Producing Large Phospholipid Vesicles'',Biochim. Biophys. Acta.

53. C. H. Ahn, M. G. Allen, W. S. N. Trimmer, Y. Jun and Shyamsunder Erramilli ``A Fully Integrated Micromachined Magnetic Particle Manipulator and Separator'' IEEE Journal of Microelectromechanical Systems.